Bioinformatics Software Engineer II - Computational Immuno-Oncology

The people of Memorial Sloan Kettering Cancer Center (MSK) are united by a singular mission: ending cancer for life. Our specialized care teams provide personalized, compassionate, expert care to patients of all ages. Informed by basic research done at our Sloan Kettering Institute, scientists across MSK collaborate to conduct innovative translational and clinical research that is driving a revolution in our understanding of cancer as a disease and improving the ability to prevent, diagnose, and treat it. MSK is dedicated to training the next generation of scientists and clinicians, who go on to pursueour missionat MSK and around the globe.

Please review important announcements about vaccination requirements and our upcoming EHR implementation by clicking here.

Important Note for MSK Employees:

Your Career Hub profile is submitted to the hiring team as your internal resume. Please be sure your profile is fully complete with your skills, relevant experience and education (if required). Click here to learn more. Please note, this link is only accessible for MSK employees.

Exciting Opportunity at MSK: Are you passionate about using technology to solve life impacting challenges? Help us change how the world treats cancer! We can provide you with the opportunity to make a difference with your career.

We are searching for a talented and self-driven Bioinformatics Software Engineer II to join our computational team in the newly established Computational Immuno-Oncology Shared Resource (CIOSR), a key pillar in MSK's immuno-oncology transformation where they will focus on establishing computational support for immune monitoring and also expanding broader IO efforts. You will be working closely with engineers, computational biologists, and researchers.

The CIOSR will provide both computational support while also recommending a set of options for in house and standard MSK pipelines to generate enhanced datasets. Examples of supported assays are flow cytometry analysis, bulk and single cell T-cell and B-cell receptor sequencing analysis and clone tracking, to name a few. You will be responsible for designing a data architecture to leverage and integrate in house immuno-oncology datasets, visualizing and interpreting data for a varied userbase, and implementing modern AI workflows.

Role Overview:
* Implement and follow the best practices in data management, data architecture, and system testing.
* Take part in technical discussion including but not limited to code reviews, and build/release management.
* Work with the software team to implement in house and standard pipeline in the immuno-oncology space.
* Gather and evaluate user requirements, in collaboration with product managers and developers.
* Participate in design, development, and support of cutting-edge multi-tiered full-stack software systems for research use.

Key Qualifications:
* Master's in Computer Science or related field with 2+ years' experience OR PhD (preferred).
* Experience with full-stack development using technologies like Python, Java, Flask, Spring, MySQL, MongoDB, ReactJS, AngularJS, or Node.js.
* Experience in containerization using Docker is desirable.
* Familiarity with Apache Kafka, RabbitMQ, or ZeroMQ is a plus.
* Experience in building scalable systems (cloud or on-prem, Kubernetes) and working with machine learning/AI tools (PyTorch is a plus).

Core Skills:
* Expertise in data management, architecture, and system testing.
* Experience with full-stack development and deployment, including automated CI/CD pipelines.
* Strong problem-solving abilities and resilience in a fast-paced, dynamic environment.
* Ability to collaborate and communicate effectively with team members and external stakeholders.
* Experience with UI design and machine learning tools is a plus.

Additional Information:
* Schedule: Hybrid
* Location: 321 E. 61st Street, NYC

Pay Range: $98,500.00-$157,600.00.

LI-HYBRID

Helpful Links:
* MSK Compensation Philosophy
* Review Our Greats Benefits Offerings

MSK is an equal opportunity and affirmative action employer committed to diversity and inclusion in all aspects of recruiting and employment. All qualified individuals are encouraged to apply and will receive consideration without regard to race, color, gender, gender identity or expression, sexual orientation, national origin, age, religion, creed, disability, veteran status, or any other factor that cannot lawfully be used as a basis for an employment decision. Federal law requires employers to provide reasonable accommodation to qualified individuals with disabilities. Please tell us if you require a reasonable accommodation to apply for a job or to perform your job.
Examples of reasonable accommodation include making a change to the application process or work procedures, providing documents in an alternate format, using a sign language interpreter, or using specialized equipment.

Pay Range $X

Please click to learn more about MSK's compensation philosophy.

MSK is an equal opportunity and affirmative action employer committed to diversity and inclusion in all aspects of recruiting and employment. All qualified individuals are encouraged to apply and will receive consideration without regard to race, color, gender, gender identity or expression, sexual orientation, national origin, age, religion, creed, disability, veteran status or any other factor which cannot lawfully be used as a basis for an employment decision.

Federal law requires employers to provide reasonable accommodation to qualified individuals with disabilities. Please tell us if you require a reasonable accommodation to apply for a job or to perform your job. Examples of reasonable accommodation include making a change to the application process or work procedures, providing documents in an alternate format, using a sign language interpreter, or using specialized equipment.